Transcript: lnc-EGFR-4:6

Basic information

LNCipedia transcript ID: lnc-EGFR-4:6 
LNCipedia gene ID: lnc-EGFR-4
Location (hg38): chr7:54759346-54841485
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 37117 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234707.2|MICT00000324342.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 40.1706 non-coding 
CPAT coding probability 5.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EGFR-4:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EGFR-4:6
5.0 lnc-EGFR-4:6
5.1 lnc-CCT6A-51:7
5.2 lnc-EGFR-4:6