Transcript: lnc-EFNB1-1:4

Basic information

LNCipedia transcript ID: lnc-EFNB1-1:4 
LNCipedia gene ID: lnc-EFNB1-1
Location (hg38): chrX:68996180-69045259
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7109 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000111502.1|MICT00000375851.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.1358 non-coding 
CPAT coding probability 5.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EFNB1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EFNB1-1:4
5.0 lnc-EFNB1-1:4
5.1 lnc-CXorf49B-44:1
5.2 lnc-EFNB1-1:4