Transcript: lnc-EEF2KMT-11:4

Basic information

LNCipedia transcript ID: lnc-EEF2KMT-11:4 
LNCipedia gene ID: lnc-EEF2KMT-11
Location (hg38): chr16:5900487-5906082
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 416 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000028585.1|MICT00000126766.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -195.5522 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EEF2KMT-11:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM86A-11:1
5.0 lnc-FAM86A-11:1
5.1 lnc-SEPT12-52:4
5.2 lnc-EEF2KMT-11:4