Transcript: lnc-EEF1AKMT1-3:3

Basic information

LNCipedia transcript ID: lnc-EEF1AKMT1-3:3 
LNCipedia gene ID: lnc-EEF1AKMT1-3
Location (hg38): chr13:20702983-20704154
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 973 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000016469.1|MICT00000091036.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 293.8629 coding 
CPAT coding probability 9.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EEF1AKMT1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-N6AMT2-3:8
5.0 lnc-N6AMT2-3:8
5.1 lnc-ZDHHC20-19:3
5.2 lnc-EEF1AKMT1-3:3