Transcript: lnc-EDRF1-3:2

Basic information

LNCipedia transcript ID: lnc-EDRF1-3:2 
LNCipedia gene ID: lnc-EDRF1-3
Location (hg38): chr10:125673234-125690572
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 670 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_401_chr10:127361802-127365325_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.5764 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDRF1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf137-3:1
4.0 lnc-C10orf137-3:1
4.1 lnc-C10orf137-3:1
5.0 lnc-C10orf137-3:1
5.1 lnc-EDRF1-3:1
5.2 lnc-EDRF1-3:2