Transcript: lnc-EDDM13-5:3

Basic information

LNCipedia transcript ID: lnc-EDDM13-5:3 
LNCipedia gene ID: lnc-EDDM13-5
Location (hg38): chr19:56314752-56338470
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7401 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267549.1|ENCT00000208693.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.5207 non-coding 
CPAT coding probability 5.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDDM13-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF583-5:6
5.0 lnc-ZNF583-5:6
5.1 lnc-ZNF583-5:6
5.2 lnc-EDDM13-5:3