Transcript: lnc-ECI2-32:1

Basic information

LNCipedia transcript ID: lnc-ECI2-32:1 
LNCipedia gene ID: lnc-ECI2-32
Ensembl Gene ID: ENSG00000285424
Ensembl Transcript ID: ENST00000642310
Location (hg38): chr6:4304942-4583871
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3989 bp
Exons: 5
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642310.1
Alternative gene names: ENSG00000285424.1; AL162718.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.7057 non-coding 
CPAT coding probability 2.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ECI2-32:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ECI2-32:1
5.1 lnc-ECI2-32:1
5.2 lnc-ECI2-32:1