Transcript: lnc-EBPL-2:1

Basic information

LNCipedia transcript ID: lnc-EBPL-2:1 
LNCipedia gene ID: lnc-EBPL-2
Location (hg38): chr13:49777668-49780631
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2923 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000424106.1; KPNA3-IT1-001; OTTHUMT00000044941.1; NONHSAT033762
Alternative gene names: ENSG00000224798.1; KPNA3-IT1; OTTHUMG00000016923.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.2224 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBPL-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EBPL-2:1
4.0 lnc-EBPL-2:1
4.1 lnc-EBPL-2:1
5.0 lnc-EBPL-2:1
5.1 lnc-CCDC169-157:2
5.2 lnc-EBPL-2:1