Transcript: lnc-EBLN1-1:3

Basic information

LNCipedia transcript ID: lnc-EBLN1-1:3 
LNCipedia gene ID: lnc-EBLN1-1
Location (hg38): chr10:22240771-22253546
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8878 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000117600.1|ENCT00000053629.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.4155 non-coding 
CPAT coding probability 3.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBLN1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DNAJC1-1:4
5.0 lnc-DNAJC1-1:4
5.1 lnc-MPP7-95:3
5.2 lnc-EBLN1-1:3