Transcript: lnc-EBF3-6:3

Basic information

LNCipedia transcript ID: lnc-EBF3-6:3 
LNCipedia gene ID: lnc-EBF3-6
Location (hg38): chr10:129034674-129036753
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2080 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000001189.1|FTMT23800007508.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.2462 non-coding 
CPAT coding probability 3.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBF3-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EBF3-6:3
5.0 lnc-EBF3-6:3
5.1 lnc-ADAM12-20:2
5.2 lnc-EBF3-6:3