Transcript: lnc-DUSP4-3:1

Basic information

LNCipedia transcript ID: lnc-DUSP4-3:1 
LNCipedia gene ID: lnc-DUSP4-3
Location (hg38): chr8:29511462-29513836
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 537 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014958; NONHSAT125818
Alternative gene names: XLOC_007037; linc-DUSP4-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.6129 non-coding 
CPAT coding probability 6.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DUSP4-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DUSP4-2:1
3.1 lnc-DUSP4-3:1
4.0 lnc-DUSP4-3:1
4.1 lnc-DUSP4-3:1
5.0 lnc-DUSP4-3:1
5.1 lnc-PURG-27:1
5.2 lnc-DUSP4-3:1