Transcript: lnc-DUSP1-3:1

Basic information

LNCipedia transcript ID: lnc-DUSP1-3:1 
LNCipedia gene ID: lnc-DUSP1-3
Location (hg38): chr5:172866618-172872815
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5969 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000514700
Alternative gene names: ENSG00000248606


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.9507 non-coding 
CPAT coding probability 28.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DUSP1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DUSP1-2:1
3.1 lnc-DUSP1-3:1
4.0 lnc-DUSP1-3:1
4.1 lnc-DUSP1-3:1
5.0 lnc-DUSP1-3:1
5.1 lnc-PDLIM7-76:1
5.2 lnc-DUSP1-3:1