Transcript: lnc-DTWD2-15:4

Basic information

LNCipedia transcript ID: lnc-DTWD2-15:4 
LNCipedia gene ID: lnc-DTWD2-15
Location (hg38): chr5:119344273-119355773
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2518 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081003.1|MICT00000287844.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.4238 non-coding 
CPAT coding probability 17.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTWD2-15:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DTWD2-15:4
5.0 lnc-DTWD2-15:4
5.1 lnc-LOX-32:3
5.2 lnc-DTWD2-15:4