Transcript: lnc-DTHD1-1:3

Basic information

LNCipedia transcript ID: lnc-DTHD1-1:3 
LNCipedia gene ID: lnc-DTHD1-1
RefSeq ID: NR_122079
Location (hg38): chr4:36244116-36274215
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1443 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122079; NR_122079.1
Alternative gene names: LOC439933


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -194.0579 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTHD1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DTHD1-1:3
4.0 lnc-DTHD1-1:3
4.1 lnc-DTHD1-1:3
5.0 lnc-DTHD1-1:3
5.1 lnc-GABRB1-89:2
5.2 lnc-DTHD1-1:3