Transcript: lnc-DNPH1-1:1

Basic information

LNCipedia transcript ID: lnc-DNPH1-1:1 
LNCipedia gene ID: lnc-DNPH1-1
Location (hg38): chr6:43213801-43224424
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1544 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245261.1|ENST00000500590.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.1884 non-coding 
CPAT coding probability 11.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNPH1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C6orf108-1:2
5.0 lnc-C6orf108-1:2
5.1 lnc-NFKBIE-26:1
5.2 lnc-DNPH1-1:1