Transcript: lnc-DNASE1L1-2:1

Basic information

LNCipedia transcript ID: lnc-DNASE1L1-2:1 
LNCipedia gene ID: lnc-DNASE1L1-2
Ensembl Gene ID: ENSG00000197180
Ensembl Transcript ID: ENST00000360656
RefSeq ID: NR_103768
Location (hg38): chrX:154424380-154428479
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 598 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT139171; NR_103768; ENST00000360656.2; NR_103768.1
Alternative gene names: ENSG00000197180.2; CH17-340M24.3; AC244090.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0982 non-coding 
CPAT coding probability 2.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNASE1L1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNASE1L1-2:1
4.0 lnc-DNASE1L1-2:1
4.1 lnc-DNASE1L1-2:1
5.0 lnc-DNASE1L1-2:1
5.1 lnc-CTAG1B-8:2
5.2 lnc-DNASE1L1-2:1