Transcript: lnc-DMRT2-2:7

Basic information

LNCipedia transcript ID: lnc-DMRT2-2:7 
LNCipedia gene ID: lnc-DMRT2-2
Location (hg38): chr9:1298276-1328584
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 711 bp
Exons: 7
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT129967; FPKM1_group_32537_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.7463 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DMRT2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DMRT2-2:7
4.0 lnc-DMRT2-2:7
4.1 lnc-DMRT2-2:7
5.0 lnc-DMRT2-2:7
5.1 lnc-RECK-302:1
5.2 lnc-DMRT2-2:7