Transcript: lnc-DLGAP1-4:1

Basic information

LNCipedia transcript ID: lnc-DLGAP1-4:1 
LNCipedia gene ID: lnc-DLGAP1-4
Location (hg38): chr18:3450872-3470475
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1656 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1511_chr18:3450869-3470473_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.557 non-coding 
CPAT coding probability 67.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DLGAP1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLGAP1-4:1
4.0 lnc-DLGAP1-4:1
4.1 lnc-DLGAP1-4:1
5.0 lnc-DLGAP1-4:1
5.1 lnc-SMAD2-353:1
5.2 lnc-DLGAP1-4:1