Transcript: lnc-DLGAP1-11:3

Basic information

LNCipedia transcript ID: lnc-DLGAP1-11:3 
LNCipedia gene ID: lnc-DLGAP1-11
Location (hg38): chr18:3445763-3448162
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1513 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000036797.1|MICT00000157857.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -189.1238 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DLGAP1-11:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DLGAP1-11:3
5.0 lnc-DLGAP1-11:3
5.1 lnc-SMAD2-354:3
5.2 lnc-DLGAP1-11:3