Transcript: lnc-DIAPH3-4:2

Basic information

LNCipedia transcript ID: lnc-DIAPH3-4:2 
LNCipedia gene ID: lnc-DIAPH3-4
Location (hg38): chr13:58821593-58823252
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 607 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034079; FPKM1_group_8010_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.1038 non-coding 
CPAT coding probability 6.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DIAPH3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DIAPH3-4:2
4.0 lnc-DIAPH3-4:2
4.1 lnc-DIAPH3-4:2
5.0 lnc-DIAPH3-4:2
5.1 lnc-CCDC169-218:2
5.2 lnc-DIAPH3-4:2