Transcript: lnc-DHX37-9:11

Basic information

LNCipedia transcript ID: lnc-DHX37-9:11 
LNCipedia gene ID: lnc-DHX37-9
Ensembl Gene ID: ENSG00000256732
Ensembl Transcript ID: ENST00000545853
Location (hg38): chr12:126610034-126690260
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 456 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000545853; ENST00000545853.1; RP11-407A16.3-001; OTTHUMT00000399853.1; NONHSAT031786
Alternative gene names: ENSG00000256732; RP11-407A16.3; ENSG00000256732.1; OTTHUMG00000168473.1; AC006065.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.7452 non-coding 
CPAT coding probability 5.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX37-9:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DHX37-9:11
3.1 lnc-DHX37-9:11
4.0 lnc-DHX37-9:11
4.1 lnc-DHX37-9:11
5.0 lnc-DHX37-9:11
5.1 lnc-DHX37-9:11
5.2 lnc-DHX37-9:11