Transcript: lnc-DEPP1-2:19

Basic information

LNCipedia transcript ID: lnc-DEPP1-2:19 
LNCipedia gene ID: lnc-DEPP1-2
Location (hg38): chr10:45002222-45071588
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2472 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT013060
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 117.5469 coding 
CPAT coding probability 23.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DEPP1-2:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf25-2:15
4.0 lnc-C10orf25-2:15
4.1 lnc-C10orf25-2:15
5.0 lnc-C10orf25-2:15
5.1 lnc-LRRC18-74:19
5.2 lnc-DEPP1-2:19