Transcript: lnc-DENND6B-1:5

Basic information

LNCipedia transcript ID: lnc-DENND6B-1:5 
LNCipedia gene ID: lnc-DENND6B-1
Location (hg38): chr22:50337083-50338130
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 984 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087476
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.0036 non-coding 
CPAT coding probability 90.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DENND6B-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM116B-1:3
4.0 lnc-FAM116B-1:3
4.1 lnc-FAM116B-1:3
5.0 lnc-FAM116B-1:3
5.1 lnc-DENND6B-1:2
5.2 lnc-DENND6B-1:5