Transcript: lnc-DENND3-7:1

Basic information

LNCipedia transcript ID: lnc-DENND3-7:1 
LNCipedia gene ID: lnc-DENND3-7
Location (hg38): chr8:141394214-141396316
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1534 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3703_chr8:142404313-142406416_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.0286 non-coding 
CPAT coding probability 8.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DENND3-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC138647.1.1-5:1
4.0 lnc-AC138647.1.1-5:1
4.1 lnc-AC138647.1.1-5:1
5.0 lnc-AC138647.1.1-5:1
5.1 lnc-GPT-88:1
5.2 lnc-DENND3-7:1