Transcript: lnc-DENND3-2:3

Basic information

LNCipedia transcript ID: lnc-DENND3-2:3 
LNCipedia gene ID: lnc-DENND3-2
Location (hg38): chr8:141059332-141061601
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1780 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT129396; FPKM1_group_32422_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.5744 non-coding 
CPAT coding probability 13.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DENND3-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DENND3-2:3
4.0 lnc-DENND3-2:3
4.1 lnc-DENND3-2:3
5.0 lnc-DENND3-2:3
5.1 lnc-GPT-98:4
5.2 lnc-DENND3-2:3