Transcript: lnc-DEGS2-2:5

Basic information

LNCipedia transcript ID: lnc-DEGS2-2:5 
LNCipedia gene ID: lnc-DEGS2-2
Location (hg38): chr14:100202725-100238621
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5079 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258982.1|MICT00000110171.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.7295 non-coding 
CPAT coding probability 1.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DEGS2-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DEGS2-2:5
5.0 lnc-DEGS2-2:5
5.1 lnc-CCDC85C-19:4
5.2 lnc-DEGS2-2:5