Transcript: lnc-DDX51-6:1

Basic information

LNCipedia transcript ID: lnc-DDX51-6:1 
LNCipedia gene ID: lnc-DDX51-6
Ensembl Gene ID: ENSG00000255933
Ensembl Transcript ID: ENST00000537032
Location (hg38): chr12:131756966-131758047
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 666 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000537032; ENST00000537032.1; RP11-495K9.5-001; OTTHUMT00000399236.1; NONHSAT032033
Alternative gene names: ENSG00000255933; RP11-495K9.5; ENSG00000255933.1; OTTHUMG00000168313.1; AC117500.3; AC117500.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.9067 non-coding 
CPAT coding probability 10.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DDX51-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DDX51-5:1
3.1 lnc-DDX51-6:1
4.0 lnc-DDX51-6:1
4.1 lnc-DDX51-6:1
5.0 lnc-DDX51-6:1
5.1 lnc-DDX51-6:1
5.2 lnc-DDX51-6:1