Transcript: lnc-DCAF4L2-2:4

Basic information

LNCipedia transcript ID: lnc-DCAF4L2-2:4 
LNCipedia gene ID: lnc-DCAF4L2-2
Ensembl Gene ID: ENSG00000253500
Ensembl Transcript ID: ENST00000440763
Location (hg38): chr8:87540835-87755695
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1860 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000440763.6
Alternative gene names: ENSG00000253500.5; AF121898.3; AF121898.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.9156 non-coding 
CPAT coding probability 2.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCAF4L2-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DCAF4L2-2:4
4.1 lnc-DCAF4L2-2:4
5.0 lnc-DCAF4L2-2:4
5.1 lnc-ZNF706-230:3
5.2 lnc-DCAF4L2-2:4