Transcript: lnc-DCAF4-7:2

Basic information

LNCipedia transcript ID: lnc-DCAF4-7:2 
LNCipedia gene ID: lnc-DCAF4-7
Location (hg38): chr14:72894264-72895248
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 985 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000019491.1|FTMT25600003033.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
YFCPGAQTLLQLFRK 92.8571428571429% antisense-2
Lee translation initiation sites non-coding 
PhyloCSF score -146.3899 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DCAF4-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DCAF4-7:2
5.0 lnc-DCAF4-7:2
5.1 lnc-ACOT2-19:2
5.2 lnc-DCAF4-7:2