Transcript: lnc-DAOA-6:1

Basic information

LNCipedia transcript ID: lnc-DAOA-6:1 
LNCipedia gene ID: lnc-DAOA-6
Location (hg38): chr13:104323428-104368459
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021887; NONHSAT035031
Alternative gene names: XLOC_010485; linc-DAOA-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.3141 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAOA-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DAOA-6:1
3.1 lnc-DAOA-6:1
4.0 lnc-DAOA-6:1
4.1 lnc-DAOA-6:1
5.0 lnc-DAOA-6:1
5.1 lnc-COL4A2-54:1
5.2 lnc-DAOA-6:1