Transcript: lnc-DAOA-14:2

Basic information

LNCipedia transcript ID: lnc-DAOA-14:2 
HGNC Gene Symbol: lnc-DAOA-14    
HGNC Full Gene Name: long intergenic non-protein coding RNA 551
Ensembl Gene ID: ENSG00000272274
Ensembl Transcript ID: ENST00000607593
Location (hg38): chr13:106617810-106631359
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1668 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607593.1
Alternative gene names: ENSG00000272274.1; LINC00551;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.0604 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAOA-14:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DAOA-5:5
4.0 LINC00443:2
4.1 LINC00443:2
5.0 LINC00443:2
5.1 lnc-COL4A2-45:2
5.2 lnc-DAOA-14:2