Transcript: lnc-DAOA-12:1

Basic information

LNCipedia transcript ID: lnc-DAOA-12:1 
LNCipedia gene ID: lnc-DAOA-12
Ensembl Gene ID: ENSG00000280455
Ensembl Transcript ID: ENST00000626943
Location (hg38): chr13:105690429-105702689
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 760 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626943.1
Alternative gene names: ENSG00000280455.1; RP11-252M24.1; AL359745.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.4678 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAOA-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DAOA-12:1
4.1 lnc-DAOA-12:1
5.0 lnc-DAOA-12:1
5.1 lnc-COL4A2-49:1
5.2 lnc-DAOA-12:1