Transcript: lnc-CYTH1-3:1

Basic information

LNCipedia transcript ID: lnc-CYTH1-3:1 
LNCipedia gene ID: lnc-CYTH1-3
Location (hg38): chr17:78532793-78533087
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 295 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243426.2|ENST00000492744.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.6695 non-coding 
CPAT coding probability 2.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CYTH1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CYTH1-1:2
5.0 lnc-CYTH1-1:2
5.1 lnc-SOCS3-6:1
5.2 lnc-CYTH1-3:1