Transcript: lnc-CTSZ-2:1

Basic information

LNCipedia transcript ID: lnc-CTSZ-2:1 
LNCipedia gene ID: lnc-CTSZ-2
Location (hg38): chr20:58863528-58888826
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 927 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000441270.1; RP1-309F20.3-001; OTTHUMT00000267997.1; NONHSAT080589
Alternative gene names: ENSG00000225806.1; RP1-309F20.3; OTTHUMG00000137369.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.9312 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTSZ-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTSZ-2:1
4.0 lnc-CTSZ-2:1
4.1 lnc-CTSZ-2:1
5.0 lnc-CTSZ-2:1
5.1 lnc-SPATA2-113:1
5.2 lnc-CTSZ-2:1