Transcript: lnc-CTSV-5:4

Basic information

LNCipedia transcript ID: lnc-CTSV-5:4 
LNCipedia gene ID: lnc-CTSV-5
Location (hg38): chr9:97237764-97238708
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203279.3|ENST00000366109.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.0809 non-coding 
CPAT coding probability 6.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTSV-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTSL2-5:7
5.0 lnc-CTSL2-5:7
5.1 lnc-FANCC-47:4
5.2 lnc-CTSV-5:4