Transcript: lnc-CTSV-2:8

Basic information

LNCipedia transcript ID: lnc-CTSV-2:8 
LNCipedia gene ID: lnc-CTSV-2
Location (hg38): chr9:97077294-97081945
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 639 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000442849.1; RP11-520B13.5-001; OTTHUMT00000053300.1
Alternative gene names: ENSG00000243534.1; RP11-520B13.5; OTTHUMG00000020313.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.8383 non-coding 
CPAT coding probability 12.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTSV-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTSL2-1:1
4.0 lnc-CTSL2-2:10
4.1 lnc-CTSL2-2:10
5.0 lnc-CTSL2-2:10
5.1 lnc-FANCC-44:8
5.2 lnc-CTSV-2:8