Transcript: lnc-CSMD1-7:9

Basic information

LNCipedia transcript ID: lnc-CSMD1-7:9 
LNCipedia gene ID: lnc-CSMD1-7
RefSeq ID: NR_136275
Location (hg38): chr8:1971179-1973345
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1501 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136275.1
Alternative gene names: LOC101928058


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.3138 non-coding 
CPAT coding probability 13.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CSMD1-7:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DEFA1B-68:9
5.1 lnc-DEFA1B-68:9
5.2 lnc-CSMD1-7:9