Transcript: lnc-CRYBA4-15:1

Basic information

LNCipedia transcript ID: lnc-CRYBA4-15:1 
LNCipedia gene ID: lnc-CRYBA4-15
Ensembl Gene ID: ENSG00000279914
Ensembl Transcript ID: ENST00000623814
Location (hg38): chr22:27040197-27041494
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1298 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623814.1
Alternative gene names: ENSG00000279914.1; CTA-992D9.10; AL008638.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.3075 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRYBA4-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CRYBA4-15:1
4.1 lnc-CRYBA4-15:1
5.0 lnc-CRYBA4-15:1
5.1 lnc-CABIN1-54:1
5.2 lnc-CRYBA4-15:1