Transcript: lnc-CPN2-4:60

Basic information

LNCipedia transcript ID: lnc-CPN2-4:60 
LNCipedia gene ID: lnc-CPN2-4
RefSeq ID: NR_136180
Location (hg38): chr3:194009963-194070970
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 932 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136180.1
Alternative gene names: LOC285389


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -147.0563 non-coding 
CPAT coding probability 49.32% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CPN2-4:60 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LRRC15-5:7
5.1 lnc-LRRC15-5:7
5.2 lnc-CPN2-4:60