Transcript: lnc-CPN2-4:47

Basic information

LNCipedia transcript ID: lnc-CPN2-4:47 
LNCipedia gene ID: lnc-CPN2-4
Location (hg38): chr3:194043221-194058494
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 667 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230102.3|HBMT00001017014.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -257.8071 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPN2-4:47 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CPN2-4:47
5.0 lnc-CPN2-4:47
5.1 lnc-LRRC15-5:19
5.2 lnc-CPN2-4:47