Transcript: lnc-CPA3-2:4

Basic information

LNCipedia transcript ID: lnc-CPA3-2:4 
LNCipedia gene ID: lnc-CPA3-2
Location (hg38): chr3:149000934-149008276
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 574 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT092615
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.1893 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CPA3-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CPA3-2:4
4.0 lnc-CPA3-2:4
4.1 lnc-CPA3-2:4
5.0 lnc-CPA3-2:4
5.1 lnc-HPS3-5:4
5.2 lnc-CPA3-2:4