Transcript: lnc-COX7A2L-4:3

Basic information

LNCipedia transcript ID: lnc-COX7A2L-4:3 
LNCipedia gene ID: lnc-COX7A2L-4
RefSeq ID: NR_110584
Location (hg38): chr2:42142435-42170231
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1460 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110584; NR_110584.1
Alternative gene names: LOC102723824


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -89.7259 non-coding 
CPAT coding probability 4.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX7A2L-4:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COX7A2L-1:3
4.0 lnc-COX7A2L-4:3
4.1 lnc-COX7A2L-4:3
5.0 lnc-COX7A2L-4:3
5.1 lnc-MAP4K3-64:8
5.2 lnc-COX7A2L-4:3