Transcript: lnc-COPS5-3:3

Basic information

LNCipedia transcript ID: lnc-COPS5-3:3 
LNCipedia gene ID: lnc-COPS5-3
Location (hg38): chr8:67061344-67083744
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 566 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT127075
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 463.6919 coding 
CPAT coding probability 19.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-COPS5-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP1R42-3:2
4.0 lnc-COPS5-3:3
4.1 lnc-COPS5-3:3
5.0 lnc-COPS5-3:3
5.1 lnc-CPA6-7:2
5.2 lnc-COPS5-3:3