Transcript: lnc-COIL-8:5

Basic information

LNCipedia transcript ID: lnc-COIL-8:5 
LNCipedia gene ID: lnc-COIL-8
Location (hg38): chr17:57251112-57256340
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3588 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000034064.1|MICT00000151115.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -41.7112 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COIL-8:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-COIL-8:5
5.0 lnc-COIL-8:5
5.1 lnc-PTRH2-44:4
5.2 lnc-COIL-8:5