Transcript: lnc-COG2-2:1

Basic information

LNCipedia transcript ID: lnc-COG2-2:1 
LNCipedia gene ID: lnc-COG2-2
Location (hg38): chr1:230784694-230788873
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 372 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT010138
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.0557 non-coding 
CPAT coding probability 16.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COG2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COG2-2:1
4.0 lnc-COG2-2:1
4.1 lnc-COG2-2:1
5.0 lnc-COG2-2:1
5.1 lnc-KCNK1-63:1
5.2 lnc-COG2-2:1