Transcript: lnc-CNNM1-1:13

Basic information

LNCipedia transcript ID: lnc-CNNM1-1:13 
LNCipedia gene ID: lnc-CNNM1-1
Ensembl Gene ID: ENSG00000224934
Ensembl Transcript ID: ENST00000641293
Location (hg38): chr10:99433545-99461743
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1636 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641293.1
Alternative gene names: ENSG00000224934.3; AL391684.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.1565 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNNM1-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SMC3-165:12
5.1 lnc-SMC3-165:12
5.2 lnc-CNNM1-1:13