Transcript: lnc-CNMD-2:3

Basic information

LNCipedia transcript ID: lnc-CNMD-2:3 
LNCipedia gene ID: lnc-CNMD-2
Ensembl Gene ID: ENSG00000273723
Ensembl Transcript ID: ENST00000620372
Location (hg38): chr13:52651305-52652279
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 975 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620372.1
Alternative gene names: ENSG00000273723.1; RP11-93H24.3; AL139089.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -19.3718 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNMD-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LECT1-2:1
4.1 lnc-LECT1-2:1
5.0 lnc-LECT1-2:1
5.1 lnc-CCDC169-195:3
5.2 lnc-CNMD-2:3