Transcript: lnc-CNBD1-4:16

Basic information

LNCipedia transcript ID: lnc-CNBD1-4:16 
LNCipedia gene ID: lnc-CNBD1-4
Location (hg38): chr8:88542617-88709727
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 541 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253553.1|ENST00000520312.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.7626 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNBD1-4:16 no no no no

Available literature

  1. Li (2015), Distinct expression profiles of lncRNAs between regressive and mature scars., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CNBD1-4:16
5.0 lnc-CNBD1-4:16
5.1 lnc-CA2-29:14
5.2 lnc-CNBD1-4:16