Transcript: lnc-CNBD1-4:14

Basic information

LNCipedia transcript ID: lnc-CNBD1-4:14 
LNCipedia gene ID: lnc-CNBD1-4
Location (hg38): chr8:88327786-88737700
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 37443 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253553.1|MICT00000347383.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 41.1725 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CNBD1-4:14 yes no no no

Available literature

  1. Li (2015), Distinct expression profiles of lncRNAs between regressive and mature scars., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CNBD1-4:14
5.0 lnc-CNBD1-4:14
5.1 lnc-CA2-29:7
5.2 lnc-CNBD1-4:14