Transcript: lnc-CLUAP1-8:2

Basic information

LNCipedia transcript ID: lnc-CLUAP1-8:2 
LNCipedia gene ID: lnc-CLUAP1-8
Location (hg38): chr16:3611779-3643095
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 955 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024800; NONHSAT148061
Alternative gene names: XLOC_011630; linc-DNASE1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.9537 non-coding 
CPAT coding probability 71.64% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLUAP1-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DNASE1-1:1
3.1 lnc-DNASE1-2:1
4.0 lnc-DNASE1-2:1
4.1 lnc-DNASE1-2:1
5.0 lnc-DNASE1-2:1
5.1 lnc-THOC6-24:2
5.2 lnc-CLUAP1-8:2